RNAJunction Database - Junction Profile:861
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 861: 1I6U_j2_C-U9_C-A24

Primary Citation: (from PDB entry 1I6U)

S.TISHCHENKO A.NIKULIN N.FOMENKOVA N.NEVSKAYA O.NIKONOV P.DUMAS H.MOINE B.EHRESMANN C.EHRESMANN W.PIENDL V.LAMZIN M.GARBER S.NIKONOV DETAILED ANALYSIS OF RNA-PROTEIN INTERACTIONS WITHIN THE RIBOSOMAL PROTEIN S8-RRNA COMPLEX FROM THE ARCHAEON METHANOCOCCUS JANNASCHII J.MOL.BIOL. V. 311 311 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1I6U j2 C-U9 C-A24 
NC-IUBMB Classification:HS3HS4Cluster Page
Angles: 145°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.53373Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain C: AGAUACUGCC 10nt

Strand 2: Chain C: GGUAAGUCU 9nt

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