RNAJunction Database - Junction Profile:921

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 921: 1I94_j2_A-U818_A-C826

Primary Citation: (from PDB entry 1I94)

M.PIOLETTI F.SCHLUENZEN J.HARMS R.ZARIVACH M.GLUEHMANN H.AVILA H.BARTELS C.JACOBI T.HARTSCH A.YONATH F.FRANCESCHI CRYSTAL STRUCTURES OF COMPLEXES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3 EMBO J. V. 20 1829 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1I94 j2 A-U818 A-C826 
NC-IUBMB Classification:HS1HS1Cluster Page
Angles: 159°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.60539Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CUGGG 5nt

Strand 2: Chain A: CCUGG 5nt

Valid XHTML 1.0 Transitional