RNAJunction

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9496: 1YRJ_j2_A-C7_B-G39

Primary Citation: (from PDB entry 1YRJ)

Q.HAN Q.ZHAO S.FISH K.B.SIMONSEN D.VOURLOUMIS J.M.FROELICH D.WALL T.HERMANN MOLECULAR RECOGNITION BY GLYCOSIDE PSEUDO BASE PAIRS AND TRIPLES IN AN APRAMYCIN-RNA COMPLEX. ANGEW.CHEM.INT.ED.ENGL. V. 44 2694 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images

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Derived Information

Type:	Bulge Loop	Cluster:	1J7T j2 A-C6 B-G37
NC-IUBMB Classification:	HS1HS2		Cluster Page
Angles:	158°
Fit Criteria:	A
Extracted Structure:	Download
Minimized Structure:	Download RMSD = 0.55959Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GUCACAC 7nt

Strand 2: Chain B: GUGAAGUC 8nt