RNAJunction Database - Junction Profile:9620

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9620: 1Z58_j5_2-C593_2-G678_2-G822_2-G1209_2-A1259

Primary Citation: (from PDB entry 1Z58)

M.AMIT R.BERISIO D.BARAM J.HARMS A.BASHAN A.YONATH A CREVICE ADJOINING THE RIBOSOME TUNNEL: HINTS FOR COTRANSLATIONAL FOLDING. FEBS LETT. V. 579 3207 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1Z58 j5 2-C593 2-G678 2-G822 2-G1209 2-A1259 
NC-IUBMB Classification:Cluster Page
Angles: 64:79:86:89:90:96:112:133:152:157°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.15234Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 2: GGCUAGACU 9nt

Strand 2: Chain 2: GCGACUUAGACC 12nt

Strand 3: Chain 2: AGUUCU 6nt

Strand 4: Chain 2: AGCGUUC 7nt

Strand 5: Chain 2: GAAGUGCGGAUGC 13nt

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