RNAJunction Database - Junction Profile:9641
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9641: 1ZFV_j2_A-A5_B-A7

Primary Citation: (from PDB entry 1ZFV)

J.E.WEDEKIND WATER IN THE ACTIVE SITE OF AN ALL-RNA HAIRPIN RIBOZYME AND EFFECTS OF GUA8 BASE VARIANTS ON THE GEOMETRY OF PHOSPHORYL TRANSFER. BIOCHEMISTRY V. 45 686 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1ZFV j2 A-A5 B-A7 
NC-IUBMB Classification:HS2HS2Cluster Page
Angles: 172°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.0764Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CCAGUCCA 8nt

Strand 2: Chain B: UGAAAAGG 8nt

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