RNAJunction Database - Junction Profile:9692
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9692: 2A9X_j2_2-G9_2-U24

Primary Citation: (from PDB entry 2A9X)

T.C.LEEPER Z.ATHANASSIOU R.L.DIAS J.A.ROBINSON G.VARANI TAR RNA RECOGNITION BY A CYCLIC PEPTIDOMIMETIC OF TAT PROTEIN. BIOCHEMISTRY V. 44 12362 2005

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1BIV j2 A-G9 A-U24 
NC-IUBMB Classification:HS1HS3Cluster Page
Angles: 151°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.29527Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 2: UCGUGUAGC 9nt

Strand 2: Chain 2: GCUCCGA 7nt

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