RNAJunction Database - Junction Profile:9819
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9819: 2AP0_j2_A-C15_A-A22

Primary Citation: (from PDB entry 2AP0)

P.V.CORNISH D.P.GIEDROC THE GLOBAL STRUCTURES OF A WILD-TYPE AND POORLY FUNCTIONAL PLANT LUTEOVIRAL MRNA PSEUDOKNOT ARE ESSENTIALLY IDENTICAL RNA V. 12 1959 2006

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2AP0 j2 A-C15 A-A22 
NC-IUBMB Classification:2HS3Cluster Page
Angles: 123°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.38825Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AAAACAA 7nt

Strand 2: Chain A: CCAC 4nt

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