RNAJunction Database - Junction Profile:9820
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9820: 2AP0_j2_A-G12_A-A27

Primary Citation: (from PDB entry 2AP0)

P.V.CORNISH D.P.GIEDROC THE GLOBAL STRUCTURES OF A WILD-TYPE AND POORLY FUNCTIONAL PLANT LUTEOVIRAL MRNA PSEUDOKNOT ARE ESSENTIALLY IDENTICAL RNA V. 12 1959 2006

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2AP0 j2 A-G12 A-A27 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 161°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.74696Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGACC 5nt

Strand 2: Chain A: AACG 4nt

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