RNAJunction Database - Junction Profile:9821
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9821: 2AP5_j2_A-G12_A-A22

Primary Citation: (from PDB entry 2AP5)

P.V.CORNISH D.P.GIEDROC THE GLOBAL STRUCTURES OF A WILD-TYPE AND POORLY FUNCTIONAL PLANT LUTEOVIRAL MRNA PSEUDOKNOT ARE ESSENTIALLY IDENTICAL RNA V. 12 1959 2006

Experimental Method: NMR

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2AP5 j2 A-G12 A-A22 
NC-IUBMB Classification:HS3HS5Cluster Page
Angles: 137°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.55342Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AAAACAACG 9nt

Strand 2: Chain A: CGACCAC 7nt

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