RNAJunction Database - Junction Profile:1015
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1015: 1I95_j5_A-C36_A-C398_A-C431_A-U478_A-C528

Primary Citation: (from PDB entry 1I95)

M.PIOLETTI F.SCHLUENZEN J.HARMS R.ZARIVACH M.GLUEHMANN H.AVILA H.BARTELS C.JACOBI T.HARTSCH A.YONATH F.FRANCESCHI CRYSTAL STRUCTURES OF COMPLEXES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3 EMBO J. V. 20 1829 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1I95 j5 A-C36 A-C398 A-C431 A-U478 A-C528 
NC-IUBMB Classification:Cluster Page
Angles: 9:52:54:83:91:97:100:107:134:142°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.78888Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGCUUGGA 8nt

Strand 2: Chain A: CGCUGGCG 8nt

Strand 3: Chain A: UCCUGAAC 8nt

Strand 4: Chain A: GGUAAUAGCG 10nt

Strand 5: Chain A: CGCGAGCG 8nt

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