RNAJunction Database - Junction Profile:10898
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10898: 2GYB_j5_A-C58_A-U103_A-A315_A-G337_A-G351

Primary Citation: (from PDB entry 2GYB)

K.MITRA J.FRANK ELONGATION ARREST BY SECM VIA A CASCADE OF RIBOSOMAL RNA REARRANGEMENTS MOL.CELL V. 22 533 2006

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:2GYB j5 A-C58 A-U103 A-A315 A-G337 A-G351 
NC-IUBMB Classification:Cluster Page
Angles: 36:57:72:76:105:107:111:119:121:176°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.16118Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AGUGGCGGACGGGU 14nt

Strand 2: Chain A: UGCAAGUCGAACG 13nt

Strand 3: Chain A: ACACUG 6nt

Strand 4: Chain A: CAGACU 6nt

Strand 5: Chain A: AGGCAGCA 8nt

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