RNAJunction Database - Junction Profile:144
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 144: 1C2W_j4_B-G1667_B-C1706_B-U1751_B-G1988

Primary Citation: (from PDB entry 1C2W)

R.BRIMACOMBE F.MUELLER : MUELLER THE 3D ARRANGEMENT OF THE 23S AND 5S RRNA IN THE ESCHERICHIA COLI 50S RIBOSOMAL SUBUNIT BASED ON A CRYO-ELECTRON MICROSCOPIC RECONSTRUCTION AT 7.5 ANGSTROMS RESOLUTION J.MOL.BIOL. V. 298 35 2000

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:4-wayCluster:1C2W j4 B-G1667 B-C1706 B-U1751 B-G1988 
NC-IUBMB Classification:Cluster Page
Angles: 57:77:94:124:127:149°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 2.95958Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: ACGC 4nt

Strand 2: Chain B: GGAACUAGGCAAAAUGGU 18nt

Strand 3: Chain B: GUCGAAGAUACCAGCU 16nt

Strand 4: Chain B: AGGCUGUC 8nt

Valid XHTML 1.0 Transitional