RNAJunction Database - Junction Profile:1453
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1453: 1J5A_j5_A-G47_A-G115_A-C128_A-U142_A-A153

Primary Citation: (from PDB entry 1J5A)

F.SCHLUENZEN R.ZARIVACH J.HARMS A.BASHAN A.TOCILJ R.ALBRECHT A.YONATH F.FRANCESCHI STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTRE IN EUBACTERIA NATURE V. 413 814 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1J5A j5 A-G47 A-G115 A-C128 A-U142 A-A153 
NC-IUBMB Classification:Cluster Page
Angles: 28:69:80:85:102:105:126:153:155:169°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.68892Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CCGAAUGGG 9nt

Strand 2: Chain A: CCGAUGAAGG 10nt

Strand 3: Chain A: CCCACC 6nt

Strand 4: Chain A: GGUAUCC 7nt

Strand 5: Chain A: GGAUGG 6nt

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