RNAJunction Database - Junction Profile:16
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 16: 1BAU_j2_A-G10_B-G12

Primary Citation: (from PDB entry 1BAU)

A.MUJEEB J.L.CLEVER T.M.BILLECI T.L.JAMES T.G.PARSLOW STRUCTURE OF THE DIMER INITIATION COMPLEX OF HIV-1 GENOMIC RNA NAT.STRUCT.BIOL. V. 5 432 1998

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1BAU j2 A-G10 B-G12 
NC-IUBMB Classification:HS2HS2Cluster Page
Angles: 115°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.82775Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AGCGCG 6nt

Strand 2: Chain B: CGCGCA 6nt

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