RNAJunction Database - Junction Profile:9625
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9625: 1ZC5_j2_A-U6_A-G32

Primary Citation: (from PDB entry 1ZC5)

C.GAUDIN M.H.MAZAURIC M.TRAIKIA E.GUITTET S.YOSHIZAWA D.FOURMY STRUCTURE OF THE RNA SIGNAL ESSENTIAL FOR TRANSLATIONAL FRAMESHIFTING IN HIV-1 J.MOL.BIOL. V. 349 1024 2005

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1ZC5 j2 A-U6 A-G32 
NC-IUBMB Classification:2HS3Cluster Page
Angles: 130°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.62774Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CAGGGAAUU 9nt

Strand 2: Chain A: GAUCUG 6nt

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